Protein ZmHAG41
ZmHAG41 is a protein in the GNAT family.
Information
Coreg Name: ZmHAG41
Species: Maize
Coreg Family: GNAT
Gene Name(Synonym): HAGTF41
Uniprot ID: A0A1D6PDQ1
Subgenome: 2

Protein ZmHAG41

ZmHAG41 is a protein in the GNAT family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d025640DAPseq no logo sequence fimo position
Zm00001d025640DAPseq no logo sequence fimo position
Zm00001d025640ChIPseq no logo sequence fimo position
Zm00001d025640PChIPseq no logo sequence fimo position

Interactions where ZmHAG41 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHAG41 is the target  
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There are 110 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb424460_T005 from maize genome v5

Amino Acid Sequence
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MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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GACGTTTATCCACGTAAGCCTGTTA...

GRMZM2G057554_T01 from maize genome v3


Related TFome: pUT5749

Amino Acid Sequence
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MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

Nucleotide Sequence
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ATCGCCGTTCTGTTTTCCCAGTTCG...

GRMZM2G057554_T02 from maize genome v3

Amino Acid Sequence
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MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

Nucleotide Sequence
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ATCGCCGTTCTGTTTTCCCAGTTCG...

Zm00001d025640_T001 from maize genome v4

Amino Acid Sequence
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MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

Nucleotide Sequence
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AAGCCTGTTACAAGAAAAAGAGACT...

Zm00001d025640_T002 from maize genome v4

Amino Acid Sequence
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MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

Nucleotide Sequence
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AAGCCTGTTACAAGAAAAAGAGACT...

Zm00001eb424460_T001 from maize genome v5

Amino Acid Sequence
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MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

Nucleotide Sequence
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GTTGACGTTTATCCACGTAAGCCTG...

Zm00001eb424460_T002 from maize genome v5

Amino Acid Sequence
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MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

Nucleotide Sequence
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GTTGACGTTTATCCACGTAAGCCTG...

Zm00001eb424460_T003 from maize genome v5

Amino Acid Sequence
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MAASPALVSLTPAVSRHPHLLFCSPCPPPRHIRLAPPTATPASDGNGLGPGPGPGVFLSPRALSQLDELAAFRYEHAFPH
GLLTVRALSRGPDDDAVAEALVRLLASSFSETVRWAPAQRYAQLLTFVIRRYLHDRRGLAPHAAVLVGFYRPADADAGAD
NANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGAPPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAK
RRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWLSLQKRKYLMSKELPQASVVSETSTKNFE

Nucleotide Sequence
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GACGTTTATCCACGTAAGCCTGTTA...

Zm00001eb424460_T004 from maize genome v5

Amino Acid Sequence
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MAASPALVSLTPAVSRYLHDRRGLAPHAAVLVGFYRPADADAGADNANAAPEDDEGEGGDEGEMACTAEVSFDAVGAPGA
PPTPTPPLNFPYICNMTVKTPLRRRGIGKQLLKACEDLVFKMNAKRRVYLHCRIIDQVPFNMYTKAGYSIVQTDSILVWL
SLQKRKYLMSKELPQASVVSETSTKNFE

Nucleotide Sequence
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GACGTTTATCCACGTAAGCCTGTTA...


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